Environ. Horticulture, Pears, Cherries, and Viticulture
University of California
Environ. Horticulture, Pears, Cherries, and Viticulture


Correct Moisture for Soil Fumigation

I've been getting some calls as of late concerning the correct soil moisture for growers to have prior to fumigation with chloropicrin, now that fumigation with methyl bromide is no longer an option.  Anyway, I checked with a colleague at Trical, who stated that the moisture requirement has definitely not changed, methyl bromide or chloropicrin, and a requirement of 50% or greater available water content in the soil has been in place for a long time.

One of the labels for chloropicrin attached below with specific instructions on soil moisture, see pages 11 & 12.



Soil moisture prep for fumigation is the same as it always was, end of story.

Also found a pretty nifty pictorial guide put out by the NRCS on estimating soil moisture, including the critical 50% or greater available water content, for different soil types.

Link here:



Posted on Monday, August 14, 2017 at 8:37 AM

Is It or Isn't It?

One of the odd things about this production year is the lack of Macrophomina showing up in strawberry in comparison to the amount of Fusarium.  While I've been called out on a good number of fields that ultimately turned out to be Fusarium (thank you Steven Koike and your diagnostic lab staff!), I haven't been called out to a single one that's been found to be Macrophomina.

Recall that both of the diseases caused by these two pathogens look very similar in the field - plant collapse associated with a discolored crown.

Now for some of the work that Steve has been doing for his DNA testing for plant pathogens, he's been eager to get his hands on Macrophomina material.  I've submitted a sample from a field off of Old Stage which had it last year and so the assumption is that it does this year too, and indeed plants are starting to go down.

I dutifully submitted a sample to Steve, and told him that if it wasn't Macrophomina I'd eat my hat.  It just has to be Macrophomina, but then again with the current spate of all Fusarium calls, who knows?

Is it or isn't it?


7/22/2017 update.  Steven Koike just emailed me, and it is indeed Macrophomina.  Guess that means I can take my hat off of the dinner table and put it back on my head where it belongs.  Thanks Steve!

Posted on Saturday, July 29, 2017 at 7:53 AM

Comparison of Triform 80 and a Novel Fumigant in Fusarium Infested Soil

Introduction:  With the discontinuation of methyl bromide as a possibility for pre-plant soil fumigation, we at UCCE have been very active in looking for viable alternatives.  One alternative, identified by the test name TRX58, having a fairly high vapor pressure and already having certain uses in agriculture, was a good one to try.

Materials and Methods:  Work was done in a field known to experience pressure from the plant pathogen Fusarium oxysporum f. sp. fragariae .  Application of the test material TRX58 (550 lb per acre) and the grower check of Triform 80 (34 gal per acre)  was done on October 5, 2015, shanked in followed by tarping with totally impermeable film (TIF).  So as to obtain adequate fumigation and coverage, both the materials were applied in blocks 22 feet wide and 200 feet long with each block replicated twice.  Two strips of 11 feet wide were placed between the fumigated plots, designated as untreated checks and not treated.

Planting of the strawberry varieties  Cabrillo, Albion, Sweet Ann, San Andreas and Monterey was done on Nov 17.  Plots were maintained as any other on the farm with adequate fertility and irrigation. Pick stations of 20 plants per variety x 4 replicates and commencing in April fruit harvest in all plots was done once a week and fruit weighed.

Statistical analysis is as below, and broken up into two halves (April + May) and then also given as a total. 

Discussion: Triform 80 is indisputably the better treatment, but it is also indisputable that TRX58 is better than doing nothing, which as one can see from the photos is not wise in this sort of situation.  It is also notable that variety such as San Andreas which is known to be "resistant" (actually tolerant is the better word) to Fusarium still loses a little bit more than half of its yield in unfumigated soil.  There is a strong case being made here for treatment of soil to maintain good strawberry yields.

A deep bow of gratitude to Miguel Ramos for letting me do this work in his field, to Mark Curtice from Lassen Canyon Nurseries who gave us the plants, and then to Trical who did the fumigation.

People should realize that without the efforts of all these people working together, we would be doing very little novel fumigation research right now.


Posted on Saturday, July 22, 2017 at 2:02 PM
Tags: Albion (3), chloropicrin (2), Fusarium (4), Monterey (4), San Andreas (3), TRX (1)

Sustainable Berry Workshop Announcement

Announcing a collaborative Sustainable Berry Workshop this coming August 9.  This event is hosted by local business Farm Fuel Inc. and sponsored by UCCE and the Shennan Lab at UCSC.  This event, the only meeting being run out of this office this summer, will give people the opportunity to get a first rate perspective on what is new in soil pathology research, as well as how to obtain funding as a grower for implementing sustainable practices. 

Catered breakfast provided, translation available as well.  See you there!

Please register by emailing info@farmfuelinc.com



Posted on Friday, July 14, 2017 at 11:14 AM

Answering the Question of Sustainability Problems of 'Repackaged' Synthetic Nitrogen in Organic Agriculture

Mark here.  The video by Dr. Eric Brennan concerning the sustainability problems of using what is essentially repackaged synthetic nitrogen in organic agriculture that I posted a few weeks ago has sparked a lot of discussion in my social circles, most recently for me at a dinner with a big ag company and a local PCA specializing in organic consultation.  These conversations turn around the same point that reader Thomas Flewell (Thom - note you got your byline!) brings up below.  Best to go to the expert on this very subject so I asked Dr. Brennan if couldn't answer the question for all of us, and he graciously accepted my invitation to do so.

Follow along below:


Thomas Flewell: Preface-  As the world population approaches 9 billion within the next 100 years, it is clear that organic farming will not serve up enough food for everyone.  
Dr Brennan's reasoning toward the use of synthetic nitrogen in organic farming is persuasive but I see an error of omission. Dr Brennan failed to note that manure derived fertilizer will be produced whether or not it is used for agriculture. Cows poop. Chickens poop. Pigs poop. Goats poop. All god's creatures poop. And none of them are raised only to produce fertilizer. So the energy to produce argument seems weak. Also, while manures are used as pre-plant fertilizer and in some instances as a top dress or side dress for crops, fish fertilizers are also used. I have had very good results with a hydrolyzed (not emulsified) fish fertilizer with a very low N analysis. Perhaps just an academic point.  

Eric Brennan:

Hi Thomas,

Thanks for your interest in my ‘repackaged' synthetic nitrogen video and for your comments on it. I've heard others raise similar questions after seeing my video. I'm working on an opinion paper that will provide more details on the arguments that I raise in the video, and hopefully will bolster my arguments with citations, and examples that I was able to fit into the video. But in the meantime here are some ideas to consider and some articles to help with that.

I agree on the value and importance of recycling nutrients from manure and animal slaughter by-products; to my knowledge slaughter by-products are more important than manure in high-value organic crops California. However, I imagine that rendering process (extraction, grinding, heating, pressing, etc.) to convert this material into pelleted fertilizers takes a fair bit of energy to ensure that the material is safe to use, and easy to handle and apply. And transporting this bulky material to where it's used is also energy-intensive. Consider an organic system in a place like my home state of Hawai'i where there is relatively limited animal production. Think of the energy costs to move organic fertilizer made of chicken manure, meat, bone, and feather meal all the way from California, for use on an organic farm in Hawai'i! To me, this seems like a relatively inefficient way to get N in these systems.

Ideally these animal production by-products could be used in organic and conventional systems near to where they are produced and in systems that need the full suite of nutrients they contain; even better would be for the nutrients in these materials to return to the systems that produced the feed for these animals. But having to rely heavily or almost exclusively on this type of fertilizer material (as in often the case in organic vegetable production in many regions) for nutrients like nitrogen (N) can be problematic and quite expensive. As I mentioned in the video, one problem is that N in many of these ‘repackaged' synthetic N fertilizers often come with excessive amounts of phosphorous (P) that far exceed what is being removed from the soil in crop yields. I became well aware of this issue of excessive P inputs in my research when I collaborated with researchers from Stanford and UC Davis to calculate P budgets (P inputs versus P outputs) in two long-term organic studies in California. This is described in detail in the a few publications like this one available here. To improve our P budgets in our long-term study in Salinas we switched from using pre-plant fertilizers with a 4-4-2 analysis to an pre-plant with a 8-1-1 analysis which was more expensive per unit of N; from what I've seen with pelleted organic fertilizers, unfortunately the materials with lower P or no P have a higher per unit cost for N. Switching to 8-1-1 helped with our P budgets, but we still were applying more P than needed when we added yard-waste compost to these systems. This improvement in our P budget is very obvious in figure 2B in of the paper note above that shows a big decline from 2007 to 2008 in the P balance. This also highlights the importance using cover crops to add carbon back to the soil, rather than over relying on compost which can add too much P. Carbon added by cover crops represents ‘on-farm carbon production' that doesn't add P, but just recycles what's already in the soil to produce the organic matter. Furthermore, organic matter inputs from cover crops appear to be a more important driver of soil health improvement than organic matter from compost. Here's our recent paper that describes that issue

Getting back to the P budget issue, during 8 years of our long-term trial on high-value vegetable production, we added more than 400 lbs of P per acre than was needed to replace what was removed in exported yields !   It's important to highlight that unlike N that we can capture out the air with biological N fixation (using legumes) and by synthetic fixation (using the Haber-Bosch process), P is a limited, mined nutrient, and there is considerable concern about the worlds dwindling P reserves; this highlights why we should only apply P when needed. Here's a link to another paper from our long-term study that provides some information the biological N fixation potential from legume-cereal cover crop mixture in these systems. While legumes do fix N in these systems, this is limited by their ability to complete with non-legumes likes cereals that provide other important services like nitrogen scavenging from previous vegetable crops, … and there can be other challenges with legume-cereal cover crops that I highlighted in this video Are legume-cereal cover crops a good fit for organic vegetable production?

Another issue to consider with organic soil fertility management that is relevant to the arguments in my ‘repackaged' synthetic N video is the total supply of manure and slaughter by-product based fertilizers available in a region like California. I don't know the extent of this supply, but it seems likely that as organic agriculture acreage grows here and uses more of these organic fertilizers, this supply of fertilizer will become more and more limited unless animal production (that relies primarily on feed grown synthetic N) increases. This is concerning because the science of climate change indicates the need for people in regions like the U.S., with excessive protein consumption, to reduce consumption of animal products. This important dietary shift to less meat consumption would likely reduce the amount of manure and slaughter by-products available for recycling as fertilizers. Furthermore, relying on fish as source of N for organic agriculture could overtax the world's oceans that are already over fished in many regions. Perhaps I'm wrong, but I don't believe there is a sound scientific basis for a total ban on the use of pure synthetic nitrogen in organic agriculture. That's why I argued for what I call ‘SPorganic' (i.e., scientifically progressive organic) agriculture that would allow the careful use of synthetic N in it's pure form, rather than only in the ‘repackaged' synthetic forms that are currently allowed in organic systems. However, I believe that limiting the use of N inputs (from ‘repackaged' and pure synthetic forms) and greater adoption of best-management practices like cover cropping, make scientific sense. ‘Enriching the Earth' by Vaclav Smil is a book that I highly recommend for additional reading on the complex issue of nitrogen in agriculture and how the Haber-Bosch process has transformed our lives and accounts for at least 40% of the world's dietary protein. Here's link to an entertaining RadioLab podcast on the Haber-Bosch story that you might also enjoy.

My N video was first presented along with 10 other 5 minute videos at a 2016 symposium that I helped organize at the American Society of Agronomy conference; here' a link to the 11 videos. One of my intentions with my N video was to start a conversation around a complex issue that I believe limits the sustainability of organic systems like those that I work with in California. Thanks for joining that conversation.

Take care, Eric Brennan


Mark here - thanks Thom and Eric for a most informative exchange - really appreciate it!!

Posted on Thursday, July 13, 2017 at 2:56 PM
  • Author: Eric Brennan
  • Author: Thomas Flewell
Tags: nitrogen (16), organic (5), synthetic nitrogen (1)

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